Plot the sequence of phases as a time series.
Usage
plotRN_phaseSeries(
phaseOutput,
showEpochLegend = TRUE,
epochColours = NULL,
epochLabel = "Phase",
excludeOther = FALSE,
excludeNorec = TRUE,
excludeVars = "",
excludePhases = "",
plotCentroid = FALSE,
returnGraph = FALSE
)
Arguments
- phaseOutput
Output from function rn_phases
- excludeOther
Exclude the default Phase "Other"
- excludeNorec
Exclude the default Phase "No recurrence"
- excludeVars
Exclude specific dimension variables by name. Leave empty to include all variables (default =
""
)- excludePhases
Exclude Phases by their name (variable
phase_name
). Leave empty to include all Phases (afterexcludeOther
andexcludeNorec
) (default =""
)
Examples
RN <- rn(y1 = rnorm(100), weighted = TRUE)
#> Set `weightedBy` to 'si' due to the value of `weighted`
phase_out <- rn_phases(RN)
#> This function uses an old version of the phase search algorithm...
#> Use rn_phaseInfo(), the new algorithm will produce different results!
#>
#> Found 15 phases with at least 2 states.
#> Warning: no non-missing arguments to max; returning -Inf
#> Warning: no non-missing arguments to max; returning -Inf
plotRN_phaseDensity(phase_out)
#> Error in ungroup(.): could not find function "ungroup"